Information for 3-TACACTCATAGGGTTT (Motif 4)

A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A A G T C A G T C G A T C A C G T C G T A A C G T A C T G C G T A T C A G A C G T C T A G A C G T C G T A
p-value:1e-17
log p-value:-4.066e+01
Information Content per bp:1.933
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.1 +/- 19.1bp
Average Position of motif in Background52.4 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TACACTCATAGGGTTT
AACAATGGTAGTGTT-
 A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TACACTCATAGGGTTT
GACCACATTCATACAAT--
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TACACTCATAGGGTTT
--CCTTAATNGNTTTT
 A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
A C G T A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PH0094.1_Lhx4/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TACACTCATAGGGTTT-
TAAACTAATTAGCTTTG
 A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T A C G T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G

Sox11/MA0869.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TACACTCATAGGGTTT
AACACTGAAATTGTT-
 A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TACACTCATAGGGTTT
AACAATGNTATTGTT-
 A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TACACTCATAGGGTTT
----ACCATATGGT--
 A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TACACTCATAGGGTTT
---AAACATATGTTT-
 A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:TACACTCATAGGGTTT
AACACTGCAATTGTTC
 A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----TACACTCATAGGGTTT
NNCATTCATTCATNNN----
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T T G A C C G T A A C G T C G T A C T A G A C T G C T A G A G C T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T A C G T