Information for 2-CTGTGTGAGTTCTCTG (Motif 2)

A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A C T A G C G T A A C T G C G T A C G T A A G T C A C G T A G T C C G T A A G T C C G T A G A T C C G T A A C T G
p-value:1e-19
log p-value:-4.435e+01
Information Content per bp:1.856
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 25.4bp
Average Position of motif in Background56.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTGTGTGAGTTCTCTG
---TGTGGATTNNN--
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGTGTGAGTTCTCTG
----TTAAGTGCTT--
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGTGTGAGTTCTCTG
CTTTGT----------
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGTGTGAGTTCTCTG--
-NATTTAAGTACTTANNA
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G A C G T A C G T
A C G T T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTGTGTGAGTTCTCTG
----TTGACTTTT---
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTGTGTGAGTTCTCTG
-NNTGTGGATTSS---
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGTGTGAGTTCTCTG-
TNNNATGATTTCNNCNN
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTGTGTGAGTTCTCTG---
--TTCNAAGTACTTNNNNN
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTGTGTGAGTTCTCTG--
-NNNCTGATATCTCNNNN
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G A C G T A C G T
A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PB0177.1_Sox7_2/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CTGTGTGAGTTCTCTG--------
--GTGCTAATTGTGTGTGTACGCT
 A G T C C G A T C T A G A C G T C T A G A C G T A C T G G T C A C T A G A C G T A C G T A G T C C G A T A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T