Information for 4-TGTAGGCTTT (Motif 16)

A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A T A C G A G T C G T A C C G A T C T G A A G T C C G T A
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.861
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif135.8
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets54.5 +/- 24.7bp
Average Position of motif in Background49.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTAGGCTTT
TRTTTACTTW
 A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTAGGCTTT
TGTTTACTTT
 A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTAGGCTTT
TGTTTACTTT
 A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTAGGCTTT----
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGTAGGCTTT
--CAAGCTT-
 A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTAGGCTTT-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGGCTTT----
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGGCTTT
TTTGTTTACTTA
 A C G T A C G T A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGGCTTT-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGTAGGCTTT
GAATGTTTGTTT-
 A C G T A C G T A C G T A C G T A C T G A G C T C G T A A C T G C T A G A T G C A C G T A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T