Information for 7-YWAAGGRAWTTCC (Motif 14)

G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A C G A T A G T C A G T C A G T C A C G T A C G T C G T A C T A G
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.864
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.1 +/- 26.3bp
Average Position of motif in Background42.8 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:YWAAGGRAWTTCC-
--NGGGGATTTCCC
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:forward strand
Alignment:YWAAGGRAWTTCC
---GGGAATTTCC
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:YWAAGGRAWTTCC
---GGGGATTTCC
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.75
Offset:4
Orientation:forward strand
Alignment:YWAAGGRAWTTCC-
----GGAAATTCCC
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.73
Offset:3
Orientation:forward strand
Alignment:YWAAGGRAWTTCC
---GGGGATTTCC
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:YWAAGGRAWTTCC--
--AGGGGAATCCCCT
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T
A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.62
Offset:6
Orientation:forward strand
Alignment:YWAAGGRAWTTCC---
------ATTTTCCATT
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YWAAGGRAWTTCC--
--AGGGGAATCCCCT
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T
A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:YWAAGGRAWTTCC---
------GCATTCCAGN
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.60
Offset:7
Orientation:forward strand
Alignment:YWAAGGRAWTTCC----
-------ATTTCCTGTN
 G A T C C G A T C G T A C G T A C T A G A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G