Information for 1-GAATGTGGBAAAACHT (Motif 1)

A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
Reverse Opposite:
C G T A C T A G A C T G G A C T A C G T A C G T A C G T T A G C A G T C G T A C C G T A A G T C C G T A A C G T A C G T A T G C
p-value:1e-23
log p-value:-5.487e+01
Information Content per bp:1.816
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.9 +/- 22.7bp
Average Position of motif in Background56.0 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GAATGTGGBAAAACHT
---CSTGGGAAAD---
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAATGTGGBAAAACHT
---NATGGAAAAN---
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATGTGGBAAAACHT
-NATGTTGCAA-----
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATGTGGBAAAACHT
-AAGGTGTKAA-----
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAATGTGGBAAAACHT
TAAAGTCGTAAAACAT
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAATGTGGBAAAACHT
---AATGGAAAAT---
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAATGTGGBAAAACHT
TAAAGTCGTAAAATAG
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAATGTGGBAAAACHT
-----TGGAAAA----
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAATGTGGBAAAACHT
--AGGTGTGAAM----
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAATGTGGBAAAACHT
-AAGGTGTGAAAAT--
 A T C G G T C A C G T A A C G T C T A G A C G T A C T G A C T G A C T G C G T A C G T A G T C A C T G A G T A C G A T C A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T