Information for 13-ACAGGCTGAG (Motif 24)

C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
p-value:1e-5
log p-value:-1.255e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets66.7 +/- 16.3bp
Average Position of motif in Background44.8 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACAGGCTGAG-
-CCTGCTGAGH
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACAGGCTGAG----------
YCAGGCWCAGTACCAGGCTC
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACAGGCTGAG---
TCNCCTGCTGNGNNN
 A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACAGGCTGAG---
NNTCCTGCTGTGNNN
 A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACAGGCTGAG---
TNTCCTGCTGTGNNG
 A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGCTGAG
CACAGN-----
 A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACAGGCTGAG-
AAAATGCTGACT
 A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACAGGCTGAG
---NGCTN--
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAGGCTGAG-----
-CAGGCCNNGGCCNN
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAGGCTGAG
-TWGTCTGV-
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T