Information for 17-TTCCCTCTGTCAG (Motif 38)

A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A T G C C G T A A C T G C G T A A C T G A C T G A C T G G T C A C G T A
p-value:1e-4
log p-value:-9.870e+00
Information Content per bp:1.930
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 25.0bp
Average Position of motif in Background26.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TTCCCTCTGTCAG
------NTGTCAN
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTCCCTCTGTCAG
-----GCTGTCAA
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TTCCCTCTGTCAG-
----VGCTGWCAVB
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TTCCCTCTGTCAG-
------YTGWCADY
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCCCTCTGTCAG
TGACACCTGTCA-
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCCCTCTGTCAG
TGACAGCTGTCA-
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCCCTCTGTCAG
TGACACCTGTCA-
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCCCTCTGTCAG
CGCCCCCTGACA-
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCCTCTGTCAG
TGACAGCTGTCA-
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TTCCCTCTGTCAG--
-------TGTCANYT
 A C G T A C G T G T A C A G T C A G T C A C G T A G T C A C G T A T C G A C G T A G T C G T C A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T