Information for 11-CTTYCATTTTTTT (Motif 27)

G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T
Reverse Opposite:
C G T A T C G A C T G A C T G A T G C A G C T A G T C A C G A T C T A G T C G A T C G A C T G A C T A G
p-value:1e-8
log p-value:-1.872e+01
Information Content per bp:1.636
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif578.6
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets52.5 +/- 23.8bp
Average Position of motif in Background50.3 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTTYCATTTTTTT
---CCATTGTTTT
 G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTTYCATTTTTTT----
-TTCAATTGTTCTAAAA
 G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTTYCATTTTTTT
TCACTTTCACTTTCN-
 A C G T A C G T A C G T G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTYCATTTTTTT
ACTTTCGTTTCT--
 A C G T G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTTYCATTTTTTT-----
----TTTTTTTTCNNGTN
 G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTYCATTTTTTT---
NNNTCCTTTGTTCTNNN
 A C G T G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTTYCATTTTTTT
--NCCATTGTTY-
 G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTTYCATTTTTTT
---CCATTGTTYB
 G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTYCATTTTTTT-----
-NNNNTTTTTTTTTNAAC
 G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTTYCATTTTTTT
ACTTTCACTTTC--
 A C G T G A T C G A C T A G C T A G C T G A T C G C T A A C G T C G A T A C G T G A C T G A C T A G C T C G A T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T