Information for 9-ACAATCCACTGAS (Motif 20)

C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
Reverse Opposite:
A T G C A C G T A G T C G T C A T A C G A G C T A C T G C T A G C G T A G A C T A C G T A C T G G A C T
p-value:1e-9
log p-value:-2.123e+01
Information Content per bp:1.690
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif50.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets59.8 +/- 23.5bp
Average Position of motif in Background46.8 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0011.1_HMG_class/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACAATCCACTGAS
AACAAT--------
 A C G T C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACAATCCACTGAS
CCAATCAA-----
 C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACAATCCACTGAS
GTAAACAAT--------
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACAATCCACTGAS
NAACAAT--------
 A C G T A C G T C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACAATCCACTGAS
RNAACAATGG------
 A C G T A C G T A C G T C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATCCACTGAS
NNNNNGAACAATTGANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAATCCACTGAS
GACAATGNN-----
 A C G T C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACAATCCACTGAS
AATGAACAATGGAATT--
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACAATCCACTGAS
SSAATCCACANN-
 C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACAATCCACTGAS
TAGTGAACAATAGATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A C T G A G C A T A G T C G T A C C T G A A T G C A C G T C T A G T G C A T A C G
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T A C G T A C G T