Information for 4-CAGTAGGACC (Motif 11)

A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C
Reverse Opposite:
C T A G A C T G A C G T T G A C A G T C A C G T T C G A G T A C A C G T A C T G
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.864
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif65.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets40.2 +/- 28.2bp
Average Position of motif in Background45.1 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGGACC-
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGGACC-
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGGACC
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGGACC
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAGTAGGACC--
TATCATTAGAACGCT
 A C G T A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAGGACC
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGTAGGACC-
-GGGAGGACNG
 A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGGACC
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGTAGGACC-
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGTAGGACC
CACAGCAGGGGG
 A C G T A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G C G T A G T A C A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G