Information for 5-AAGAATCTTC (Motif 9)

C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C
Reverse Opposite:
A C T G G C T A C T G A A T C G G T C A A C G T G A C T G T A C C G A T A C G T
p-value:1e-11
log p-value:-2.577e+01
Information Content per bp:1.844
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif136.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets51.6 +/- 20.0bp
Average Position of motif in Background53.5 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAGAATCTTC-----
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAGAATCTTC-----
TAGAANVTTCTAGAA
 C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AAGAATCTTC-
-----GCTTCC
 C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGAATCTTC-----
--GAANNTTCTAGAA
 C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGAATCTTC
TTCTAGAACGTTC
 A C G T A C G T A C G T C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGAATCTTC
ATGAATATTC
 C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGAATCTTC
TTCTAGAACGTTC
 A C G T A C G T A C G T C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAGAATCTTC--
CTCATGAATATTCAT
 A C G T A C G T A C G T C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGAATCTTC
NAACAAT----
 A C G T C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAGAATCTTC-
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T G A C G T A C A G T A T G C A G C T C G A T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T