Information for 12-CTTGAAACTTACC (Motif 18)

G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
Reverse Opposite:
T C A G A C T G C G A T G T C A C T G A T A C G G A C T A C G T C G A T A G T C C G T A G T C A C A T G
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.704
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif91.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets37.5 +/- 26.4bp
Average Position of motif in Background50.5 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTTGAAACTTACC
TTTGAAACCG---
 G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAAACTTACC
ATAACCACTTGAAAATT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTTGAAACTTACC
ACTGAAACCA---
 G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAAACTTACC
TAAGCCACTTGAAATT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAAACTTACC
TAAGCCACTTGAAATT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAAACTTACC
TAAGCCACTTGAATTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTGAAACTTACC
TGACCTTGAN-------
 A C G T A C G T A C G T A C G T G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CTTGAAACTTACC
GCTGACCTTGAACTN----
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTTGAAACTTACC
-TTGACAGG----
 G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTTGAAACTTACC
-TTGACAG-----
 G A T C A C G T C G A T A C T G C G T A T C G A C G T A A G T C A G C T A C G T G C T A T A G C A G T C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T