Information for 3-CYTGCCCCGTGCHGGG (Motif 5)

A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C T G A G T C G T C A A G T C A C T G C A T G A C T G A T C G A G T C G T C A C T A G A C T G
p-value:1e-13
log p-value:-3.014e+01
Information Content per bp:1.775
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 30.8bp
Average Position of motif in Background44.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CYTGCCCCGTGCHGGG
--TGGCACGTGCCA--
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CYTGCCCCGTGCHGGG-
--GGCCYCCTGCTGDGH
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

HES5/MA0821.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CYTGCCCCGTGCHGGG
--TGGCACGTGCCG--
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CYTGCCCCGTGCHGGG
---GACACGTGCC---
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CYTGCCCCGTGCHGGG
----CCCCCTGCTGTG
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CYTGCCCCGTGCHGGG
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CYTGCCCCGTGCHGGG
---GCCACGTG-----
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CYTGCCCCGTGCHGGG
---GACACGTGCC---
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
A C G T A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CYTGCCCCGTGCHGGG
--CGCCTCAGGCA---
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CYTGCCCCGTGCHGGG
--NGCCTNAGGCN---
 A G T C A G C T A C G T A C T G A T G C A G T C G T A C T A G C C T A G A C G T A C T G A G T C G A C T C T A G A C T G A C T G
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T