Information for 12-GGWGARGATT (Motif 45)

A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T
Reverse Opposite:
T C G A G C T A A G C T A G T C A G T C C A G T A G T C C G T A A T G C A G T C
p-value:1e-7
log p-value:-1.625e+01
Information Content per bp:1.738
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.18%
Number of Background Sequences with motif663.7
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets46.8 +/- 30.1bp
Average Position of motif in Background50.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGWGARGATT--
NNTGTGGATTSS
 A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGWGARGATT---
--TGTGGATTNNN
 A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGWGARGATT
AGGTGTTAAT-
 A C G T A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGWGARGATT--
-AAGAGGATTAG
 A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T A C G T A C G T
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGWGARGATT-------
AGAGGGGATTAATTTAT
 A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGWGARGATT-----
CGTTGGGGATTAGCCT
 A C G T A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGWGARGATT
CAGGTGAGG---
 A C G T A C G T A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGWGARGATT
GGGGNGGGGC--
 A C G T A C G T A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGWGARGATT
CGGAGC-----
 A C G T A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGWGARGATT------
TGAACCGGATTAATGAA
 A C G T A C T G A T C G C G A T A C T G G T C A C T A G C T A G C T G A C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A