Information for 24-TCCGGTCACGTCACAC (Motif 43)

A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
Reverse Opposite:
A C T G A G C T A T C G A C G T A T C G C G T A A G T C A C T G A C G T A C T G C G T A A G T C G T A C A C T G A C T G T C G A
p-value:1e-7
log p-value:-1.714e+01
Information Content per bp:1.909
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.6 +/- 27.0bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TCCGGTCACGTCACAC
--CGGTGACGTCAC--
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCCGGTCACGTCACAC
-CCGGTCACGTGA---
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TCCGGTCACGTCACAC
----GTCACGTGACYV
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

BHLHE41/MA0636.1/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCCGGTCACGTCACAC
----GTCACGTGAC--
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCCGGTCACGTCACAC
--CNGTCACGCCAC--
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCCGGTCACGTCACAC
---GGTCACGTGGC--
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCCGGTCACGTCACAC
---GGTCACATGAC--
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCCGGTCACGTCACAC-
-NCGATGACGTCATCGN
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C A C G T
A C G T G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCCGGTCACGTCACAC
----ATCACGTGAC--
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A C G T A C G T A C G T T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCCGGTCACGTCACAC
----ATCACGTGAC--
 A G C T A G T C G T A C A C T G A C T G C G A T A G T C C G T A A G T C C T A G A C G T A T G C C G T A A T G C C T G A A G T C
A C G T A C G T A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C A C G T A C G T