Information for 17-TTAGACTCGGGGT (Motif 40)

A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T
Reverse Opposite:
C T G A A T G C T A G C A G T C A G T C A C T G G T C A C T A G A C G T A G T C C G A T C T G A C G T A
p-value:1e-8
log p-value:-1.859e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.1 +/- 23.3bp
Average Position of motif in Background58.7 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTAGACTCGGGGT--
NTNGCCTCAGGCNNN
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTAGACTCGGGGT--
NTCGCCTCAGGCAAT
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTAGACTCGGGGT-----
-NNNATTGGGGGTNTCCT
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTAGACTCGGGGT--
NTCCCCTCAGGGANT
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTAGACTCGGGGT-
--TGCCCNGGGGCA
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTAGACTCGGGGT
WTGSCCTSAGGS-
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTAGACTCGGGGT-
----GCTCGGSCTC
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTAGACTCGGGGT
NNAATTAGTCACGGT--
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TTAGACTCGGGGT
--TGCCTGAGGCN
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTAGACTCGGGGT--
---GCCTCAGGGCAT
 A C G T A G C T C G T A A C T G G T C A A G T C A C G T A G T C A C T G A C T G A C T G A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T