Information for 1-GTTGAAAGTTCTT (Motif 3)

A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T G T A C C T G A C T G A A G T C
p-value:1e-13
log p-value:-3.167e+01
Information Content per bp:1.832
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.7 +/- 28.6bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF4/MA0771.1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTTGAAAGTTCTT---
---GAANNTTCTAGAA
 A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HSF1/MA0486.2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTTGAAAGTTCTT---
---GAACGTTCTAGAA
 A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTTGAAAGTTCTT---
---GAANGTTCTAGAA
 A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTTGAAAGTTCTT----
-CTTTAAGTACTTAATG
 A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAAAGTTCTT-
GGATTGACAGGTCNTT
 A C G T A C G T A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTGAAAGTTCTT---
-TAGAANVTTCTAGAA
 A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTGAAAGTTCTT
GGTGYTGACAGS----
 A C G T A C G T A C G T A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTTGAAAGTTCTT-----
-TTTTAAGTACTTAAATT
 A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTTGAAAGTTCTT---
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTTGAAAGTTCTT-----
-TACTAAGTACTTAAATG
 A C T G A G C T A G C T A C T G C G T A G T C A G T C A T A C G C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G