Information for 4-TAACARGGCC (Motif 21)

C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C
Reverse Opposite:
A C T G A T C G G T A C A G T C A G C T A G C T A C T G A G C T A G C T C G T A
p-value:1e-10
log p-value:-2.372e+01
Information Content per bp:1.810
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif51.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets49.8 +/- 31.2bp
Average Position of motif in Background48.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TAACARGGCC---
---CAAGGHCANV
 C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TAACARGGCC-
---CTAGGCCT
 C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAACARGGCC-
---CNAGGCCT
 C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C A C G T
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAACARGGCC
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAACARGGCC-
-NTCAAGGTCA
 C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TAACARGGCC--
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAACARGGCC-
-BTCAAGGTCA
 C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAACARGGCC
-AACAGGTGT
 C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TAACARGGCC
GTTAACTAGN--
 A C G T A C G T C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TAACARGGCC--
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T C G A T C T G A C T G A A G T C C T G A C T G A A C T G C A T G A T G C A G T C A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T