Information for 11-TWAGCTATTAACMMTW (Motif 19)

C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
Reverse Opposite:
C G A T C T G A A C G T A C T G A C T G A C G T C G A T C G T A C T G A A C G T C G T A A C T G A G T C A C G T C G T A G C T A
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.776
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 25.3bp
Average Position of motif in Background57.0 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TWAGCTATTAACMMTW
AAAAACCATTAAGG---
 A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G A C G T A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TWAGCTATTAACMMTW
ACAAGCAATTAAAGAAT
 A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TWAGCTATTAACMMTW
ACAAGCAATTAAAGAAT
 A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hmx3/MA0898.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TWAGCTATTAACMMTW
ACAAGCAATTAAAGAAT
 A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TWAGCTATTAACMMTW
ACAAGCAATTAAAGAAT
 A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TWAGCTATTAACMMTW
ACAAGCAATTAATGAAT
 A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TWAGCTATTAACMMTW
ACAAGCAATTAATGAAT
 A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TWAGCTATTAACMMTW
AAAAACCAATTAAGAA--
 A C G T A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TWAGCTATTAACMMTW
AGTTAATGATTAACT---
 A C G T A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TWAGCTATTAACMMTW
GTTAATNATTAAC----
 A C G T C A G T C G A T C G T A T C A G A G T C A C G T G T C A A G C T A C G T C G T A C G T A G T A C G T A C G T C A A G C T C G T A
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T A C G T A C G T