Information for 6-TGGCCACACGGGA (Motif 18)

A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A
Reverse Opposite:
A C G T A G T C G T A C A G T C A T C G A C G T A C T G C G A T A C T G A C T G A T G C A G T C C T G A
p-value:1e-10
log p-value:-2.532e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.6 +/- 25.2bp
Average Position of motif in Background57.4 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGCCACACGGGA
-GTCCCCAGGGGA
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Mlxip/MA0622.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGGCCACACGGGA
-----ACACGTGC
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A
A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCACACGGGA
WTGSCCTSAGGS--
 A C G T A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGGCCACACGGGA--
-----NCACGTGACN
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

BHLHE40/MA0464.2/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGCCACACGGGA-
----ATCACGTGAC
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A A C G T
A C G T A C G T A C G T A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C

TFE3/MA0831.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGCCACACGGGA-
----ATCACGTGAC
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGGCCACACGGGA-
--GCCTCAGGGCAT
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGGCCACACGGGA
-----GCACGTGA
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A
A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TGGCCACACGGGA
------CACGTG-
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TGGCCACACGGGA-
------CACGTGNC
 A G C T A C T G A T C G A G T C A G T C C G T A A G T C C G T A A T G C A C T G A C T G A C T G T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C