Information for 8-ATGGAATAAAGGAACC (Motif 15)

T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
Reverse Opposite:
C T A G A T C G G A C T A G C T A G T C G A T C G A C T A C G T A G C T G C T A A G C T A C G T A G T C G A T C G T C A A C G T
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.478
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 21.2bp
Average Position of motif in Background59.8 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATGGAATAAAGGAACC
GGAAGGAAGGAAGGAAGG
 A C G T A C G T T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATGGAATAAAGGAACC
--GGAACAAAGR----
 T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATGGAATAAAGGAACC
--AAAACAAAGG----
 T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGGAATAAAGGAACC
ATAAGAACAAAGGACTA
 A C G T T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATGGAATAAAGGAACC
--CAAATTCCGGAACC
 T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
A C G T A C G T G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGGAATAAAGGAACC
AGAAGAACAAAGGACTA
 A C G T T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATGGAATAAAGGAACC
----AACAAAGG----
 T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGGAATAAAGGAACC--
NANTGGAAAAANTGAGTCAN
 A C G T A C G T T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.58
Offset:7
Orientation:forward strand
Alignment:ATGGAATAAAGGAACC
-------AGAGGAA--
 T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATGGAATAAAGGAACC
---GAACAATGGN---
 T G C A C A G T C T A G T C A G T C G A T C G A C G A T T C G A T G C A C G T A C T A G T C A G T C G A C T G A T A G C G A T C
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T