Information for 5-TCAGWGGMAGGGCCAG (Motif 8)

A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G
Reverse Opposite:
A T G C A C G T T A C G A C T G A G T C A G T C G A T C A C G T A C G T G T A C A G T C C G A T A T G C C G A T A T C G C T G A
p-value:1e-9
log p-value:-2.226e+01
Information Content per bp:1.773
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 22.0bp
Average Position of motif in Background57.0 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGWGGMAGGGCCAG
--TGGGGAAGGGCM--
 A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G
A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TCAGWGGMAGGGCCAG-
-------CAAGGHCANV
 A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCAGWGGMAGGGCCAG
--AGAGGAAGTG----
 A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCAGWGGMAGGGCCAG
--GGGGGCGGGGCC--
 A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCAGWGGMAGGGCCAG----
TCAGCACCATGGACAGCTCC
 A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCAGWGGMAGGGCCAG----
TTCAGCACCATGGACAGCGCC
 A C G T A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCAGWGGMAGGGCCAG
--AGAGGAA-------
 A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCAGWGGMAGGGCCAG
-TAGGGCAAAGGTCA-
 A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TCAGWGGMAGGGCCAG
-----BTCAAGGTCA-
 A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Stat6/MA0520.1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TCAGWGGMAGGGCCAG
ANTTCTCAGGAANNN----
 A C G T A C G T A C G T A G C T A T G C C G T A A T C G G C T A C T A G A C T G T G C A C G T A C T A G A C T G A C T G G T A C A T G C C G T A A T C G
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T A C G T A C G T A C G T