Information for 1-CCAAAGGTCAKTTCCT (Motif 2)

A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G C T G A G T C A T G A C A C G T A T C G C G T A A T G C G T A C A G C T A C G T C A G T A C T G A C T G
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.757
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 29.8bp
Average Position of motif in Background41.4 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCAAAGGTCAKTTCCT
-CAAAGGTCAG-----
 A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCAAAGGTCAKTTCCT
TCTCAAAGGTCACCTG--
 A C G T A C G T A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCAAAGGTCAKTTCCT
TCTCAAAGGTCACGAG--
 A C G T A C G T A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAAAGGTCAKTTCCT
ANGNAAAGGTCA------
 A C G T A C G T A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCAAAGGTCAKTTCCT
-TCAAGGTCAN-----
 A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAAAGGTCAKTTCCT
-TCAAGGTCAT-----
 A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAAAGGTCAKTTCCT
TATTCAAGGTCATGCGA-
 A C G T A C G T A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T

RARA/MA0729.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCAAAGGTCAKTTCCT
GAGGTCAAAAGGTCAATG---
 A C G T A C G T A C G T A C G T A C G T A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAAAGGTCAKTTCCT
-TCAAGGTCATA----
 A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCAAAGGTCAKTTCCT
BTCAAGGTCA------
 A G T C T G A C G C T A G T C A C T G A A C T G A T C G C G A T A T G C G T C A A C T G A C G T A G C T G T A C A G T C A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T