Information for 7-TGGNCACCGAGTCCAC (Motif 14)

A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C
Reverse Opposite:
A T C G A G C T C A T G A T C G T G C A A G T C G C A T G A T C A C T G A C T G C A G T A C T G A T G C A G T C A G T C T C G A
p-value:1e-8
log p-value:-1.918e+01
Information Content per bp:1.751
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 5.8bp
Average Position of motif in Background58.9 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGNCACCGAGTCCAC--
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGGNCACCGAGTCCAC
------CAAAGGTCAG
 A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

RXRA::VDR/MA0074.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGNCACCGAGTCCAC
GGGTCAACGAGTTCA-
 A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGNCACCGAGTCCAC
CANAGNNCAAAGTCCA-
 A C G T A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGNCACCGAGTCCAC-
-GGGGTCAAAGTCCAAT
 A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGNCACCGAGTCCAC
AGAGTCCAAAGTCCA-
 A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGNCACCGAGTCCAC
AGGTCACCCTGACCT-
 A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGGNCACCGAGTCCAC---
---GGCAAAAGTCCAATAA
 A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.54
Offset:10
Orientation:forward strand
Alignment:TGGNCACCGAGTCCAC
----------ATCCAC
 A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGNCACCGAGTCCAC
NAGGTCACNNTGACC--
 A C G T A C G T A C T G C T A G A T C G A G T C G T C A A G T C T A G C C T A G C G T A A C T G A C G T A T G C G T A C C T G A A T G C
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T