Information for 6-AGGGMGCAGCBGG (Motif 11)

T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G
Reverse Opposite:
A T G C A G T C T C G A A T C G A G T C G A C T A T C G T A G C A C T G T A G C A T G C A G T C A C G T
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.708
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif8.58%
Number of Background Sequences with motif949.0
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets52.1 +/- 26.9bp
Average Position of motif in Background48.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:AGGGMGCAGCBGG-
----CGCAGCTGCG
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AGGGMGCAGCBGG
---CAGCAGCTGN
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGGGMGCAGCBGG----
NNNNAGCAGCTGCTGAN
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGGGMGCAGCBGG-
-NGNGACAGCTGCN
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGGGMGCAGCBGG-
--NNAGCAGCTGCT
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G A C G T
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGGGMGCAGCBGG-
--NNVVCAGCTGBN
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G A C G T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:AGGGMGCAGCBGG-
----AGCAGCTGCT
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:AGGGMGCAGCBGG--
-----GCAGCTGTNN
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AGGGMGCAGCBGG--
----GACAGCTGCAG
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AGGGMGCAGCBGG
----ANCAGCTG-
 T G C A A C T G A T C G A T C G G T A C A T C G A T G C C T G A A C T G A T G C A G C T A C T G A T C G
A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T