Information for 3-AGGAGRAATAACT (Motif 5)

C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T
Reverse Opposite:
C G T A T C A G C G A T A C G T T G C A A C G T A G C T A G T C A G T C G C A T A G T C A G T C A G C T
p-value:1e-14
log p-value:-3.329e+01
Information Content per bp:1.694
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif4.59%
Number of Background Sequences with motif198.5
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets43.7 +/- 24.3bp
Average Position of motif in Background50.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGAGRAATAACT---
AAGGCGAAATCATCGCA
 A C G T C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGAGRAATAACT
GGAGGGGGAA-----
 A C G T A C G T C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGAGRAATAACT--
TGAGGGGGATTAACTAT
 A C G T A C G T C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGAGRAATAACT
-GGGGGAATCCCC
 C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGAGRAATAACT--
TGAGGGGGATTAACTAT
 A C G T A C G T C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGAGRAATAACT--
TTAAGGGGATTAACTAC
 A C G T A C G T C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGAGRAATAACT
GGGAGGACNG---
 C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGAGRAATAACT
-CCWGGAATGY--
 C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T
A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGAGRAATAACT---
AGGGGGATTAGCTGCC
 C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGAGRAATAACT
AGATGCAATCCC-
 C T G A A C T G T A C G C G T A C T A G C T A G T C G A G T C A A C G T G T C A G C T A A G T C G C A T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T