Information for 25-CTGTGTTTTGTGT (Motif 38)

A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A G T A C C G T A A G T C C G T A C G T A C T G A C G T A A G T C C G T A A G T C C T G A A T C G
p-value:1e-3
log p-value:-6.975e+00
Information Content per bp:1.913
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 17.7bp
Average Position of motif in Background45.0 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTTTTGTGT--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGTGTTTTGTGT
CTGTGGTTTN---
 A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGTGTTTTGTGT--
CTTTGTTTACTTTTN
 A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGTGTTTTGTGT
GTCTGTGGTTT----
 A C G T A C G T A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTTTTGTGT
GCTGTGGTTT----
 A C G T A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTTTTGTGT
NNTGTGGTTT----
 A C G T A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTGTTTTGTGT
-TGTGGATTNNN-
 A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTTTTGTGT
TGCTGTGATTT----
 A C G T A C G T A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGTGTTTTGTGT------
---NNNNTTGTGTGCTTNN
 A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGTGTTTTGTGT------
---NNTTTTGTTTTGATNT
 A T G C A G C T A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T