Information for 21-TCTAAGAKGTRRA (Motif 35)

A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A
Reverse Opposite:
A C G T A G C T G A C T T C G A G A T C G T C A G A C T A G T C A C G T A G C T C T G A A C T G C T G A
p-value:1e-6
log p-value:-1.487e+01
Information Content per bp:1.683
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif328.6
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets46.9 +/- 25.0bp
Average Position of motif in Background50.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCTAAGAKGTRRA
---AAGGTGTGAA
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCTAAGAKGTRRA-
---TAGGTGTGAAG
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A A C G T
A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCTAAGAKGTRRA-
----AGGTGTGAAA
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTAAGAKGTRRA----
GAAAAGGTGTGAAAATT
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCTAAGAKGTRRA
TTTCTNAGAAAN---
 A C G T A C G T A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTAAGAKGTRRA---
---AAGGTGTGAAAAT
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCTAAGAKGTRRA-
----AGGTGTTAAT
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTAAGAKGTRRA-
---AAGGTGTGAAA
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A A C G T
A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCTAAGAKGTRRA
----AGGTGTGA-
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A
A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCTAAGAKGTRRA
---AAGGTGTKAA
 A G C T T G A C A G C T T C G A C G T A A C T G C T G A C A G T C T A G A G C T C T G A C T G A C G T A
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A