Information for 19-AHTTTTGCATTGA (Motif 34)

C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A
Reverse Opposite:
A C G T G T A C C T G A G T C A A C G T A C T G A G T C C G T A C G T A G C T A C G T A C T A G G A C T
p-value:1e-6
log p-value:-1.560e+01
Information Content per bp:1.682
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif188.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets47.2 +/- 28.9bp
Average Position of motif in Background50.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AHTTTTGCATTGA--
NNNTATTGAATTGNNN
 A C G T C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AHTTTTGCATTGA
-ATTTTCCATT--
 C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AHTTTTGCATTGA
ANATTTTTGCAANTN
 A C G T A C G T C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AHTTTTGCATTGA
-ATTTTCCATT--
 C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AHTTTTGCATTGA----
-NNCATTCATTCATNNN
 C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AHTTTTGCATTGA----
--NANTTCATTGAATTA
 C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AHTTTTGCATTGA
TTCATTTGCATAT-
 A C G T C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AHTTTTGCATTGA
-ATTTTCCATT--
 C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AHTTTTGCATTGA------
--NNTTCCTTTGATCTNNA
 C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:AHTTTTGCATTGA-----
--------ATTGATTYND
 C G T A G A T C C G A T C G A T G C A T C G A T T C A G T G A C T G C A A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T