Information for 15-CKTGCTGTCCRGT (Motif 29)

T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
Reverse Opposite:
T C G A G A T C G A T C A C T G A C T G G T C A G T A C C G T A A C T G A G T C G T C A T G C A A T C G
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.739
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif56.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets39.1 +/- 22.0bp
Average Position of motif in Background45.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CKTGCTGTCCRGT
---GCTGTCAA--
 T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CKTGCTGTCCRGT
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CKTGCTGTCCRGT
---CCTGTCAA--
 T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CKTGCTGTCCRGT
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CKTGCTGTCCRGT
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CKTGCTGTCCRGT
---GCTGTG----
 T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CKTGCTGTCCRGT
CCCCCTGCTGTG----
 A C G T A C G T A C G T T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CKTGCTGTCCRGT
----NTGTCAN--
 T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CKTGCTGTCCRGT--
NNNCAGCTGTCAATATN
 A C G T A C G T T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CKTGCTGTCCRGT
AATTTGCTGAC----
 A C G T A C G T T A G C A C G T A C G T A C T G A G T C C G A T C A T G C A G T A G T C G T A C C T A G C T A G A G C T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T