Information for 13-CMGCGATGGACCC (Motif 27)

A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C
Reverse Opposite:
C A T G A C T G A C T G A G C T A G T C A G T C C T G A A C G T G T A C A C T G A G T C A C G T C T A G
p-value:1e-7
log p-value:-1.791e+01
Information Content per bp:1.720
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif31.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets59.3 +/- 24.8bp
Average Position of motif in Background48.8 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CMGCGATGGACCC
--GGGCGGGACC-
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CMGCGATGGACCC------
--NNANTTGACCCCTNNNN
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CMGCGATGGACCC
-GRTGMTRGAGCC
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CMGCGATGGACCC
-------TGACCT
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CMGCGATGGACCC--
-----GTGGGCCCCA
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CMGCGATGGACCC
TGGGGAAGGGCM-
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CMGCGATGGACCC---
------AAGACCCYYN
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CMGCGATGGACCC------
--NNNNTTGACCCCTNNNN
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CMGCGATGGACCC-------
----TATCGACCCCCCACAG
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CMGCGATGGACCC------
---NNCNTGACCCCGCTCT
 A G T C G T C A C T A G G T A C A C T G T C G A A G C T A C T G C T A G C T G A A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T