Information for 15-AAATRAGTAARTAAGT (Motif 23)

C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
Reverse Opposite:
C G T A A G T C A G C T A G C T G C T A A G T C A G C T A G C T T C G A A G T C C G A T A G C T C G T A G C A T A C G T C G A T
p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.721
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.0 +/- 25.6bp
Average Position of motif in Background42.1 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAATRAGTAARTAAGT
AAAAAGAGGAAGTA---
 A C G T C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAATRAGTAARTAAGT--
-AAAAAGTAAACAAAGAC
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAATRAGTAARTAAGT
---AAAGTAAACA---
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAATRAGTAARTAAGT
---WAAGTAAAYA---
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAATRAGTAARTAAGT-
--CAAAGTAAACANNNN
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T A C G T
A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAATRAGTAARTAAGT
---TATGTAAATAT--
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAATRAGTAARTAAGT
---TATGTAAACANG-
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAATRAGTAARTAAGT
AAATAAGAAAAAAC--
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAATRAGTAARTAAGT
---TATGTAAATAT--
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAATRAGTAARTAAGT
---AAAGTAAACA---
 C G T A G T C A C G T A C G A T C T G A C G T A C T A G A C G T C T G A C T G A C T A G C G A T T C G A C T G A C T A G A C G T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T