Information for 14-CGACYCTGACCTKACT (Motif 21)

G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
Reverse Opposite:
C G T A A C T G A C G T G T A C C G T A A C T G A C T G A C G T A G T C C G T A A C T G C T A G C T A G A C G T A G T C A C T G
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.750
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 24.5bp
Average Position of motif in Background61.0 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT
------TGACCTYA--
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT
------TGACCTTGAT
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT
------TGACCT----
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT
------TGACCTARTT
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT
-----GTGACCTT---
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT
TGACCTTGACCT----
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT
TGACCTTGACCT----
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGACYCTGACCTKACT
-----CTGCCCGCA--
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT---
-----TTGACCTANTTATN
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGACYCTGACCTKACT
-----CTGACCTTTG-
 G T A C T A C G G T C A G A T C A G T C A G T C C G A T A C T G T C G A G T A C A G T C C G A T A C T G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T