p-value: | 1e-18 |
log p-value: | -4.172e+01 |
Information Content per bp: | 1.952 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.61% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 25.7 +/- 9.4bp |
Average Position of motif in Background | 41.0 +/- 15.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTGACTGGAGTTC- GGGTTACTANAGGTCA |
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PB0169.1_Sox15_2/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGACTGGAGTTC-- TTGAATGAAATTCGA |
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Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GTGACTGGAGTTC- NNGAGGTTACTNNAGGTCA |
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TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTGACTGGAGTTC ---NCTGGAATGC |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGACTGGAGTTC NNTNNTGTCTGGNNTNG |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTGACTGGAGTTC -GGTCTGGCAT-- |
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Vdr/MA0693.1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTGACTGGAGTTC- GAGTTCATTGAGTTCA |
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PB0134.1_Hnf4a_2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGACTGGAGTTC---- -NNATTGGACTTTNGNN |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGACTGGAGTTC CTGTCTGG----- |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GTGACTGGAGTTC- ----CTYRAGTGSY |
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