Information for 4-TAAAGCTTTCTTT (Motif 9)

A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T
Reverse Opposite:
G T C A T C G A C G T A T A C G G C T A C T G A C T G A T C A G A G T C A G C T A C G T G A C T C T G A
p-value:1e-14
log p-value:-3.315e+01
Information Content per bp:1.774
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif83.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets54.9 +/- 26.9bp
Average Position of motif in Background52.8 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TAAAGCTTTCTTT
--AAGCTTG----
 A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAAAGCTTTCTTT
NTAATKGTTT----
 A C G T A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TAAAGCTTTCTTT-
----CCTTTGTTTT
 A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TAAAGCTTTCTTT
NGYCATAAAWCH------
 A C G T A C G T A C G T A C G T A C G T A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TAAAGCTTTCTTT---
----ACTTTCACTTTC
 A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TAAAGCTTTCTTT-------
-----CTTTGTTTACTTTTN
 A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TAAAGCTTTCTTT----
-ANTCCTTTGTCTNNNN
 A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TAAAGCTTTCTTT---
NNNCTGATATCTCNNNN
 A C G T A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TAAAGCTTTCTTT-----
-NNNNTTTTTTTTTNAAC
 A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TAAAGCTTTCTTT-
----ACTTCCTGTT
 A G C T C T G A C G T A C T G A C T A G A G T C A G C T G A C T C A G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T