Information for 22-GGGTCGCCTTAGC (Motif 34)

A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A C G T A A C T G A C T G A G T C A C T G C G T A A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.478e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 29.8bp
Average Position of motif in Background30.2 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGTCGCCTTAGC--
-NGTTGCCATGGCAA
 A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C A C G T A C G T
A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGTCGCCTTAGC
NRRGGGTCTT------
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGGTCGCCTTAGC---
--GTTGCCATGGCAAC
 A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGTCGCCTTAGC---
-KGTTGCCATGGCAAC
 A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGTCGCCTTAGC---
CGGTTGCCATGGCAAC
 A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGTCGCCTTAGC--
-GGTTGCCATGGCAA
 A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C A C G T A C G T
A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GGGTCGCCTTAGC
CGCGCCGGGTCACGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGGTCGCCTTAGC
NNGGCCACGCCTTTN-
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

PROX1/MA0794.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGTCGCCTTAGC
CAAGACGCCTTA--
 A C G T A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGGTCGCCTTAGC
ANCGCGCGCCCTTNN
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T C G T A A C T G A G T C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T