Information for 12-GCWCTTCACAGGGTGA (Motif 22)

A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
Reverse Opposite:
C G A T G T A C C G T A A T G C A G T C A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G C G A T A T C G G T A C
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 29.9bp
Average Position of motif in Background24.7 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCWCTTCACAGGGTGA
--ACWTCAAAGG----
 A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCWCTTCACAGGGTGA
--ACATCAAAGG----
 A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCWCTTCACAGGGTGA
--ACATCAAAGGNA--
 A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCWCTTCACAGGGTGA
AAAGATCAAAGGAA--
 A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCWCTTCACAGGGTGA
NSCACTYVAV-------
 A C G T A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCWCTTCACAGGGTGA
RSCACTYRAG-------
 A C G T A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCWCTTCACAGGGTGA
CCACTTGAA-------
 A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCWCTTCACAGGGTGA
----TTGACAGC----
 A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCWCTTCACAGGGTGA
ACCACTTGAA-------
 A C G T A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCWCTTCACAGGGTGA
AASCACTCAA--------
 A C G T A C G T A C T G A T G C G C A T A G T C A C G T A C G T G T A C C G T A T A G C C G T A A C T G C T A G A T C G G A C T A C T G C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T