Information for 4-ADGCCTCATT (Motif 18)

T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T
Reverse Opposite:
G C T A T C G A A G C T T A C G T C G A C A T G C T A G A T G C G A C T A C G T
p-value:1e-11
log p-value:-2.581e+01
Information Content per bp:1.562
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif113.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets65.2 +/- 19.6bp
Average Position of motif in Background47.7 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ADGCCTCATT------
GCAACCTCATTATNNNN
 A C G T T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ADGCCTCATT------
NNNACCTCATTATCNTN
 A C G T T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ADGCCTCATT--
--AGCTCATTAT
 T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T A C G T A C G T
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ADGCCTCATT-------
TGTTCCCATTGTGTACT
 T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ADGCCTCATT
ATGACTCAT-
 T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T
T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ADGCCTCATT---
---GCTAATTAGC
 T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

LBX1/MA0618.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ADGCCTCATT--
----CTAATTAA
 T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ADGCCTCATT-
---NCTAATTA
 T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T A C G T
A C G T A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A

NFE2/MA0841.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ADGCCTCATT
CATGACTCATC
 A C G T T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

GSX1/MA0892.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ADGCCTCATT---
---CCTAATTAAA
 T G C A C T G A T A C G G A T C G T A C A G C T A T G C T C G A A G C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A