Information for 9-GTCSMGKRGCMTYCTS (Motif 16)

A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
Reverse Opposite:
T A C G T G C A A C T G T C G A C G T A A C T G A T C G A G T C A G T C G T C A A G T C A C T G A T G C A C T G G T C A A G T C
p-value:1e-11
log p-value:-2.644e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 34.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTCSMGKRGCMTYCTS
NNGTCGCGTGNCAC----
 A C G T A C G T A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GTCSMGKRGCMTYCTS
AATTTCAAGTGGCTTN---
 A C G T A C G T A C G T A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GTCSMGKRGCMTYCTS
GGTCACGTGGC------
 A C G T A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GTCSMGKRGCMTYCTS
----CGGAGC------
 A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:GTCSMGKRGCMTYCTS
---CAGCTGTTTCCT-
 A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---GTCSMGKRGCMTYCTS
AANTTCAAGTGGCTTN---
 A C G T A C G T A C G T A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.46
Offset:7
Orientation:reverse strand
Alignment:GTCSMGKRGCMTYCTS------
-------RGSMTBCTGGGAAAT
 A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:GTCSMGKRGCMTYCTS-
---NNGCACCTTTCTCC
 A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C A C G T
A C G T A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--GTCSMGKRGCMTYCTS
CCGCCCAAGGGCAG----
 A C G T A C G T A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GTCSMGKRGCMTYCTS
RTCATGTGAC------
 A C T G A C G T A G T C A T C G G T A C A C T G A C G T C T A G C T A G A T G C G T A C A C G T A G C T A G T C A C G T A T G C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T