Information for 9-AGCCATTTGTATT (Motif 12)

C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T
Reverse Opposite:
C G T A C G T A C G A T C G T A A T G C C G T A C G T A C G T A A C G T A C T G T A C G A T G C A C G T
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 22.9bp
Average Position of motif in Background55.6 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AGCCATTTGTATT
AGGGAAGTCATTTCT---
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGCCATTTGTATT
---CCTTTGTTTT
 C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCCATTTGTATT-
TAAGCCACTTGAATTT
 A C G T A C G T C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCCATTTGTATT
-CTCATTTGCATW
 C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCCATTTGTATT
--CCATATGT---
 C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCCATTTGTATT
-ACCATATGTT--
 C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCCATTTGTATT-
-TTCATTTGCATAT
 C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCCATTTGTATT-
TAAGCCACTTGAAATT
 A C G T A C G T C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGCCATTTGTATT-
----ATTTGCATAA
 C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGCCATTTGTATT-
----ATTTGCATAT
 C G T A A T C G A T G C A G T C C G T A A C G T A C G T A C G T A T C G A C G T C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T