Information for 19-AGATTGTCAGGCA (Motif 43)

C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A C G T
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 10.2bp
Average Position of motif in Background41.6 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGATTGTCAGGCA
TGAGTGACAGSC-
 C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGATTGTCAGGCA
--VBTGWCAGCB-
 C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGATTGTCAGGCA
NTGATTGACAGN--
 A C G T C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGATTGTCAGGCA
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGATTGTCAGGCA---
NNATTGACAGGTGCTT
 C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATTGTCAGGCA
BTGABTGACAGS--
 A C G T C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGATTGTCAGGCA
---NTGTCAN---
 C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGATTGTCAGGCA
AAAATTGTTATGAA
 A C G T C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGATTGTCAGGCA
CTCATTGTC-----
 A C G T C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGATTGTCAGGCA
---YTGWCADY--
 C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A G T C C G T A
A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T