Information for 2-CCARGCTGGCGGCCKG (Motif 4)

T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C G T C A A C T G A C T G G T A C A G T C A C T G A T G C A G T C C G T A A C T G A G T C A G C T A G C T C T A G A C T G
p-value:1e-14
log p-value:-3.227e+01
Information Content per bp:1.806
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.7 +/- 23.2bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCARGCTGGCGGCCKG
-CAAGATGGCGGC---
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCARGCTGGCGGCCKG
--TGGCAGNCTGCCAG
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCARGCTGGCGGCCKG
-CAAGATGGCGGC---
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCARGCTGGCGGCCKG
CTTGGCANNNTGCCAA
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CCARGCTGGCGGCCKG-
---------AGGCCTAG
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCARGCTGGCGGCCKG--
-NAGANTGGCGGGGNGNA
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CCARGCTGGCGGCCKG
-------GGCGCGCT-
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCARGCTGGCGGCCKG
---NGCTN--------
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CCARGCTGGCGGCCKG
DCHCAGCAGGRGGCC--
 A C G T T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CCARGCTGGCGGCCKG----
YCAGGCWCAGTACCAGGCTC
 T A G C A G T C T C G A C T A G A C T G A G T C C G A T A C T G T A C G A G T C C T A G A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C