Information for 13-GAGCAGCACCTGG (Motif 37)

T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G
Reverse Opposite:
A T G C A T G C C G T A C T A G C T A G C A G T A T C G T A G C C G A T A C T G G T A C A C G T A T G C
p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.725
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif151.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets50.3 +/- 22.9bp
Average Position of motif in Background49.1 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF3/MA0522.2/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GAGCAGCACCTGG-
----AACACCTGCT
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T
A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GAGCAGCACCTGG-
----CGCACCTGCT
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T
A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GAGCAGCACCTGG-
----NNCACCTGNN
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T
A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GAGCAGCACCTGG-
----ACCACCTGTT
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T
A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GAGCAGCACCTGG-
----TACACCTGTC
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T
A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAGCAGCACCTGG--
---SNGCACCTGCHS
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAGCAGCACCTGG
ADGGYAGYAGCATCT--
 A C G T A C G T A C G T A C G T T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAGCAGCACCTGG----
NNNNAGCAGCTGCTGAN
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GAGCAGCACCTGG---
----NVCAGCTGBBNN
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGCAGCACCTGG----
NNTNCGCACCTGTNGAN
 T A C G G T C A C A T G G T A C C G T A A C T G T A G C G C T A A G T C A G T C C G A T A T C G A T C G A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T