Information for 10-ACATGTTRGWKAW (Motif 26)

C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
Reverse Opposite:
C G T A A G C T G T A C G C T A A G T C A G C T C G T A C G T A A G T C C G T A A C G T A C T G A C G T
p-value:1e-9
log p-value:-2.274e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 12.3bp
Average Position of motif in Background70.0 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTTRGWKAW
AATATACATGTAAAATT-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTTRGWKAW
AATATACATGTAAAACA-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTTRGWKAW
TAAATACATGTAAAATT-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTTRGWKAW
AATATACATGTAATATA-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTTRGWKAW
AAAATACATGTAATACT-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ACATGTTRGWKAW
ANTTNTACATGTANTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACATGTTRGWKAW
CCACCTGTTGCAT--
 A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ACATGTTRGWKAW
ANCCACCTGTTGCNC--
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACATGTTRGWKAW
ACCATATGTT------
 A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACATGTTRGWKAW
AACACGTGTT------
 A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T C T G A A C T G C G A T A C T G C T G A C G A T
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T