Information for 13-CAMWGGWGTMWGWCCW (Motif 21)

A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
Reverse Opposite:
G C A T A C T G A C T G C G A T A G T C C G T A A C G T C G T A G T A C C G A T A G T C A G T C C G T A A C G T A C G T A C T G
p-value:1e-11
log p-value:-2.620e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 22.4bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAMWGGWGTMWGWCCW
---AGGTGHCAGACA-
 A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAMWGGWGTMWGWCCW
AACAAAGG----------
 A C G T A C G T A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAMWGGWGTMWGWCCW-
-ATTGGACTTTGACCCC
 A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAMWGGWGTMWGWCCW
---AGGTGNCAGACAG
 A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAMWGGWGTMWGWCCW
RACAAWGG----------
 A C G T A C G T A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAMWGGWGTMWGWCCW
NTNNNAGGAGTCTCNTN-
 A C G T A C G T A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAMWGGWGTMWGWCCW
ACAAAGGNBCCT-----
 A C G T A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAMWGGWGTMWGWCCW
TNNNNGGTGTCATNTNT
 A C G T A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CAMWGGWGTMWGWCCW
---AGGTGTGA-----
 A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:CAMWGGWGTMWGWCCW
----------TGACCT
 A G T C C G T A G T C A C G A T A C T G A C T G G C A T A C T G A C G T G T C A C G A T A C T G C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T