p-value: | 1e-16 |
log p-value: | -3.897e+01 |
Information Content per bp: | 1.599 |
Number of Target Sequences with motif | 26.0 |
Percentage of Target Sequences with motif | 3.84% |
Number of Background Sequences with motif | 190.8 |
Percentage of Background Sequences with motif | 0.39% |
Average Position of motif in Targets | 57.2 +/- 25.3bp |
Average Position of motif in Background | 48.9 +/- 25.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hoxd8/MA0910.1/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | RAMAGBATYAATGKCY- TAAATAATTAATGGCTA |
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PH0080.1_Hoxd8/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | RAMAGBATYAATGKCY- TAAATAATTAATGGCTA |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | RAMAGBATYAATGKCY ----TGATTRATGGCY |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -RAMAGBATYAATGKCY TGAAGGGATTAATCATC |
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PH0073.1_Hoxc9/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | RAMAGBATYAATGKCY--- ---NNAATTAATGACCNNN |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | RAMAGBATYAATGKCY ------GTTAATGGCC |
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PH0063.1_Hoxb8/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | RAMAGBATYAATGKCY--- ---TTTATTAATTGCNNGN |
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PH0150.1_Pou4f3/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | RAMAGBATYAATGKCY GACNTCATTAATAANN |
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PH0126.1_Obox6/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --RAMAGBATYAATGKCY AAAAACGGATTATTG--- |
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Dmbx1/MA0883.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --RAMAGBATYAATGKCY TGAACCGGATTAATGAA- |
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