Information for 5-CTGCACTCCATGATCA (Motif 8)

A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
Reverse Opposite:
A C G T C T A G C T G A C G A T G T A C C G T A A G C T C T A G A C T G G T C A A C T G A G C T C T A G G T A C C G T A A C T G
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.791
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 23.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGCACTCCATGATCA--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCACTCCATGATCA
-TGAACCCGATGACCC
 A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

Vdr/MA0693.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCACTCCATGATCA-
-TGAACTCNATGAACTC
 A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A A C G T
A C G T G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGCACTCCATGATCA
---GGCTCYAKCAYC-
 A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGCACTCCATGATCA
--GTCCGCCATTA---
 A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGCACTCCATGATCA
GYCTGGYYTNTGTCA---
 A C G T A C G T A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGCACTCCATGATCA
-NSCACTYVAV-----
 A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------CTGCACTCCATGATCA
AATCGCACTGCATTCCG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTGCACTCCATGATCA
-ATCACCCCAT-----
 A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CTGCACTCCATGATCA
ANCGCGCGCCCTTNN--
 A C G T A G T C A C G T A C T G A G T C C T G A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A A G C T A G T C C G T A
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T