Information for 9-CAACGTGAGT (Motif 45)

A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C C G T A A G T C A C T G C G A T A C G T C T A G
p-value:1e-5
log p-value:-1.378e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 17.4bp
Average Position of motif in Background76.9 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAACGTGAGT---
TTGACCGAGAATTCC
 A C G T A C G T A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAACGTGAGT---
NNNACCGAGAGTNNN
 A C G T A C G T A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Arnt/MA0004.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAACGTGAGT
-CACGTG---
 A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T
A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAACGTGAGT
GGGTACGTGC--
 A C G T A C G T A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAACGTGAGT--
-CAGGTAAGTAT
 A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAACGTGAGT
KCCACGTGAC-
 A C G T A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAACGTGAGT
RTACGTGC--
 A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAACGTGAGT
NCCACGTG---
 A C G T A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAACGTGAGT
GCCACGTG---
 A C G T A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAACGTGAGT
GGACGTGC--
 A G T C C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T