Information for 19-TCTCTCGTTTTTT (Motif 40)

A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A C G T A C G T A C G T A A G T C A C T G C G T A A C T G C G T A A C T G C T G A
p-value:1e-6
log p-value:-1.454e+01
Information Content per bp:1.934
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 23.8bp
Average Position of motif in Background77.0 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCTCTCGTTTTTT
ACTTTCGTTTCT-
 A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCGTTTTTT---
TNNTTTCGTATTNNANN
 A C G T A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTCGTTTTTT
NNAATTCTCGNTNAN-
 A C G T A C G T A C G T A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCGTTTTTT
AGTATTCTCGGTTGC-
 A C G T A C G T A C G T A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCTCTCGTTTTTT---
-NTNTTGTTGTTTGTN
 A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCGTTTTTT
ACCACTCTCGGTCAC-
 A C G T A C G T A C G T A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCGTTTTTT-
CTCTCGCGAGATCTG
 A C G T A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTCTCGTTTTTT-
ATTATCGATTTTTT
 A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCGTTTTTT--
AAAACATCGTTTTTAAG
 A C G T A C G T A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCTCTCGTTTTTT-
ANTATCGATTTTTN
 A G C T A G T C A C G T A G T C A C G T A G T C C T A G A C G T C G A T A C G T A C G T A G C T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T