Information for 21-GGCAGCCTCKGGGTAG (Motif 39)

A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T G A A G T C A T G C A G T C T G A C A C T G G T C A A C T G A T C G A G T C A C G T A C T G A G T C A T G C
p-value:1e-6
log p-value:-1.580e+01
Information Content per bp:1.827
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.6 +/- 29.0bp
Average Position of motif in Background48.9 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCAGCCTCKGGGTAG
---TGCCCNGGGGCA-
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCAGCCTCKGGGTAG
CGCAGCTGCG------
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGCCTCKGGGTAG
NNNNAGCAGCTGCTGAN---
 A C G T A C G T A C G T A C G T A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGCAGCCTCKGGGTAG
----GCCTCAGGGCAT
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCAGCCTCKGGGTAG
---TGCCCTNGGGCA-
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCAGCCTCKGGGTAG
AGCAGCTGCTNN----
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGCAGCCTCKGGGTAG
---TGCCCTNGGGCA-
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCAGCCTCKGGGTAG
AGCAGCTGCT------
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGCAGCCTCKGGGTAG
-NCAGCTGCTG-----
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGCAGCCTCKGGGTAG
--CAGCC---------
 A T C G A C T G A G T C C G T A A C T G A T G C G T A C A C G T A G T C A C G T A C T G A T C G A C T G A G C T C T G A A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T